Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.34□□□□□ -0.11
CcsQ9WU84 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CcsQ9WU84 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.34□□□□□ -0.11
CcsQ9WU84 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.34□□□□□ -0.11
CcsQ9WU84 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 BC021767-201ENSMUST00000126387 1716 ntBASIC14.34□□□□□ -0.11
CcsQ9WU84 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CcsQ9WU84 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CcsQ9WU84 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CcsQ9WU84 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CcsQ9WU84 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CcsQ9WU84 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CcsQ9WU84 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcsQ9WU84 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcsQ9WU84 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcsQ9WU84 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CcsQ9WU84 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CcsQ9WU84 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcsQ9WU84 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CcsQ9WU84 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CcsQ9WU84 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcsQ9WU84 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcsQ9WU84 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcsQ9WU84 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CcsQ9WU84 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcsQ9WU84 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.31□□□□□ -0.12
CcsQ9WU84 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CcsQ9WU84 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.3□□□□□ -0.12
CcsQ9WU84 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CcsQ9WU84 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CcsQ9WU84 Gm27454-201ENSMUST00000185090 204 ntBASIC14.3□□□□□ -0.12
CcsQ9WU84 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CcsQ9WU84 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.3□□□□□ -0.12
CcsQ9WU84 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CcsQ9WU84 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.3□□□□□ -0.12
CcsQ9WU84 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CcsQ9WU84 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CcsQ9WU84 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CcsQ9WU84 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms