Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Gm11249-201ENSMUST00000117071 859 ntBASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn8aQ9WTU3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Zfp783-201ENSMUST00000095946 670 ntBASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn8aQ9WTU3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Gm5643-201ENSMUST00000117081 966 ntBASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn8aQ9WTU3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn8aQ9WTU3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn8aQ9WTU3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn8aQ9WTU3 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.71■□□□□ 0.59
Scn8aQ9WTU3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn8aQ9WTU3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn8aQ9WTU3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Scn8aQ9WTU3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn8aQ9WTU3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn8aQ9WTU3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Scn8aQ9WTU3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Scn8aQ9WTU3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Scn8aQ9WTU3 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.7■□□□□ 0.58
Scn8aQ9WTU3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Scn8aQ9WTU3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.7■□□□□ 0.58
Scn8aQ9WTU3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Scn8aQ9WTU3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn8aQ9WTU3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Gm13158-201ENSMUST00000122007 736 ntBASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Scn8aQ9WTU3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.68■□□□□ 0.58
Scn8aQ9WTU3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms