Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RpgrQ9R0X5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RpgrQ9R0X5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RpgrQ9R0X5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RpgrQ9R0X5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.74■□□□□ 0.59
RpgrQ9R0X5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RpgrQ9R0X5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RpgrQ9R0X5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RpgrQ9R0X5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RpgrQ9R0X5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Gm10493-201ENSMUST00000097270 612 ntBASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RpgrQ9R0X5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RpgrQ9R0X5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RpgrQ9R0X5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms