Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps29Q9QZ88 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vps29Q9QZ88 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.75■□□□□ 0.43
Vps29Q9QZ88 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Vps29Q9QZ88 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.75■□□□□ 0.43
Vps29Q9QZ88 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.75■□□□□ 0.43
Vps29Q9QZ88 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps29Q9QZ88 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.75■□□□□ 0.43
Vps29Q9QZ88 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps29Q9QZ88 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps29Q9QZ88 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
Vps29Q9QZ88 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Gm13234-201ENSMUST00000120010 747 ntBASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps29Q9QZ88 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps29Q9QZ88 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Gm13534-201ENSMUST00000121169 513 ntBASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vps29Q9QZ88 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Vps29Q9QZ88 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps29Q9QZ88 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps29Q9QZ88 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps29Q9QZ88 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Gm42778-201ENSMUST00000199644 553 ntBASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Gm10493-201ENSMUST00000097270 612 ntBASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps29Q9QZ88 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps29Q9QZ88 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps29Q9QZ88 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.68■□□□□ 0.42
Vps29Q9QZ88 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms