Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SrfQ9JM73 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.54■□□□□ 0.4
SrfQ9JM73 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.54■□□□□ 0.4
SrfQ9JM73 Gm18025-201ENSMUST00000221733 862 ntBASIC17.54■□□□□ 0.4
SrfQ9JM73 Mtag2-201ENSMUST00000058665 714 ntBASIC17.54■□□□□ 0.4
SrfQ9JM73 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SrfQ9JM73 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SrfQ9JM73 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SrfQ9JM73 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SrfQ9JM73 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SrfQ9JM73 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SrfQ9JM73 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SrfQ9JM73 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SrfQ9JM73 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SrfQ9JM73 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SrfQ9JM73 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SrfQ9JM73 Gm30025-201ENSMUST00000218555 728 ntBASIC17.53■□□□□ 0.4
SrfQ9JM73 Odf3b-204ENSMUST00000227834 930 ntBASIC17.53■□□□□ 0.4
SrfQ9JM73 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SrfQ9JM73 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SrfQ9JM73 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SrfQ9JM73 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SrfQ9JM73 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SrfQ9JM73 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SrfQ9JM73 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.52■□□□□ 0.4
SrfQ9JM73 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SrfQ9JM73 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SrfQ9JM73 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SrfQ9JM73 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.52■□□□□ 0.4
SrfQ9JM73 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.52■□□□□ 0.4
SrfQ9JM73 Gm38285-201ENSMUST00000192928 922 ntBASIC17.52■□□□□ 0.4
SrfQ9JM73 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.52■□□□□ 0.4
SrfQ9JM73 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.52■□□□□ 0.4
SrfQ9JM73 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SrfQ9JM73 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.52■□□□□ 0.39
SrfQ9JM73 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SrfQ9JM73 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
SrfQ9JM73 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SrfQ9JM73 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SrfQ9JM73 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SrfQ9JM73 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SrfQ9JM73 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.51■□□□□ 0.39
SrfQ9JM73 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.51■□□□□ 0.39
SrfQ9JM73 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SrfQ9JM73 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SrfQ9JM73 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SrfQ9JM73 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SrfQ9JM73 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SrfQ9JM73 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SrfQ9JM73 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SrfQ9JM73 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SrfQ9JM73 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SrfQ9JM73 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SrfQ9JM73 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SrfQ9JM73 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.5■□□□□ 0.39
SrfQ9JM73 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SrfQ9JM73 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SrfQ9JM73 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SrfQ9JM73 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.5■□□□□ 0.39
SrfQ9JM73 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.5■□□□□ 0.39
SrfQ9JM73 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.5■□□□□ 0.39
SrfQ9JM73 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SrfQ9JM73 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SrfQ9JM73 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SrfQ9JM73 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SrfQ9JM73 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SrfQ9JM73 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SrfQ9JM73 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SrfQ9JM73 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.49■□□□□ 0.39
SrfQ9JM73 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SrfQ9JM73 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.49■□□□□ 0.39
SrfQ9JM73 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SrfQ9JM73 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.49■□□□□ 0.39
SrfQ9JM73 Mir6349-201ENSMUST00000184059 97 ntBASIC17.49■□□□□ 0.39
SrfQ9JM73 Timm23-208ENSMUST00000226683 750 ntBASIC17.49■□□□□ 0.39
SrfQ9JM73 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SrfQ9JM73 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SrfQ9JM73 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.49■□□□□ 0.39
SrfQ9JM73 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SrfQ9JM73 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.48■□□□□ 0.39
SrfQ9JM73 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SrfQ9JM73 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SrfQ9JM73 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
SrfQ9JM73 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.48■□□□□ 0.39
SrfQ9JM73 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SrfQ9JM73 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SrfQ9JM73 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SrfQ9JM73 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SrfQ9JM73 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.48■□□□□ 0.39
SrfQ9JM73 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms