Protein–RNA interactions for Protein: Q9JLV2

Trpc4ap, Short transient receptor potential channel 4-associated protein, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc4apQ9JLV2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpc4apQ9JLV2 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.2■□□□□ 0.5
Trpc4apQ9JLV2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpc4apQ9JLV2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpc4apQ9JLV2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trpc4apQ9JLV2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpc4apQ9JLV2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.19■□□□□ 0.5
Trpc4apQ9JLV2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpc4apQ9JLV2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpc4apQ9JLV2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trpc4apQ9JLV2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trpc4apQ9JLV2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpc4apQ9JLV2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpc4apQ9JLV2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpc4apQ9JLV2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trpc4apQ9JLV2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.15■□□□□ 0.5
Trpc4apQ9JLV2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trpc4apQ9JLV2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 Gm38205-201ENSMUST00000192243 258 ntBASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpc4apQ9JLV2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms