Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubb3Q9ERD7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubb3Q9ERD7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Tubb3Q9ERD7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubb3Q9ERD7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubb3Q9ERD7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubb3Q9ERD7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubb3Q9ERD7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tubb3Q9ERD7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubb3Q9ERD7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubb3Q9ERD7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.39■□□□□ 0.53
Tubb3Q9ERD7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubb3Q9ERD7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubb3Q9ERD7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tubb3Q9ERD7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubb3Q9ERD7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tubb3Q9ERD7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.36■□□□□ 0.53
Tubb3Q9ERD7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubb3Q9ERD7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tubb3Q9ERD7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubb3Q9ERD7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubb3Q9ERD7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubb3Q9ERD7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tubb3Q9ERD7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tubb3Q9ERD7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms