Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Gm15820-201ENSMUST00000201566 728 ntBASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Gm5812-201ENSMUST00000061073 957 ntBASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn3Q9DCB1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn3Q9DCB1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hmgn3Q9DCB1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hmgn3Q9DCB1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.39■□□□□ 0.37
Hmgn3Q9DCB1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hmgn3Q9DCB1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Serp2-204ENSMUST00000228055 705 ntBASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.37■□□□□ 0.37
Hmgn3Q9DCB1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn3Q9DCB1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms