Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmg20aQ9DC33 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmg20aQ9DC33 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.96■□□□□ 0.3
Hmg20aQ9DC33 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmg20aQ9DC33 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmg20aQ9DC33 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Gm10399-202ENSMUST00000202768 748 ntBASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmg20aQ9DC33 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Mir6236-201ENSMUST00000184437 123 ntBASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmg20aQ9DC33 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Gm10232-201ENSMUST00000089221 720 ntBASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmg20aQ9DC33 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmg20aQ9DC33 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms