Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.15■□□□□ 0.5
Rrp8Q9DB85 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.15■□□□□ 0.5
Rrp8Q9DB85 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rrp8Q9DB85 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Gm11927-201ENSMUST00000118472 759 ntBASIC18.14■□□□□ 0.49
Rrp8Q9DB85 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rrp8Q9DB85 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.13■□□□□ 0.49
Rrp8Q9DB85 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rrp8Q9DB85 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rrp8Q9DB85 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Gm11643-201ENSMUST00000119578 864 ntBASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrp8Q9DB85 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms