Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap53Q9D439 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Cfap53Q9D439 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap53Q9D439 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cfap53Q9D439 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cfap53Q9D439 Gm42642-201ENSMUST00000200683 355 ntBASIC20.31■□□□□ 0.84
Cfap53Q9D439 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap53Q9D439 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap53Q9D439 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cfap53Q9D439 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cfap53Q9D439 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap53Q9D439 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Gm13534-201ENSMUST00000121169 513 ntBASIC20.3■□□□□ 0.84
Cfap53Q9D439 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cfap53Q9D439 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cfap53Q9D439 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Gm18284-201ENSMUST00000172604 624 ntBASIC20.29■□□□□ 0.84
Cfap53Q9D439 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap53Q9D439 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap53Q9D439 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap53Q9D439 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap53Q9D439 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap53Q9D439 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap53Q9D439 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.28■□□□□ 0.84
Cfap53Q9D439 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.28■□□□□ 0.84
Cfap53Q9D439 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap53Q9D439 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Cfap53Q9D439 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap53Q9D439 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap53Q9D439 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Gm10033-202ENSMUST00000211874 928 ntBASIC20.27■□□□□ 0.84
Cfap53Q9D439 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap53Q9D439 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap53Q9D439 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cfap53Q9D439 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cfap53Q9D439 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.27■□□□□ 0.83
Cfap53Q9D439 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cfap53Q9D439 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.26■□□□□ 0.83
Cfap53Q9D439 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap53Q9D439 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap53Q9D439 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.26■□□□□ 0.83
Cfap53Q9D439 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cfap53Q9D439 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Cfap53Q9D439 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cfap53Q9D439 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Cfap53Q9D439 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cfap53Q9D439 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms