Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk1aQ9D132 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk1aQ9D132 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk1aQ9D132 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk1aQ9D132 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Upk1aQ9D132 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk1aQ9D132 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk1aQ9D132 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk1aQ9D132 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk1aQ9D132 Gm12251-201ENSMUST00000117893 792 ntBASIC17.58■□□□□ 0.4
Upk1aQ9D132 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Upk1aQ9D132 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.58■□□□□ 0.4
Upk1aQ9D132 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk1aQ9D132 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk1aQ9D132 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.58■□□□□ 0.4
Upk1aQ9D132 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.58■□□□□ 0.4
Upk1aQ9D132 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1aQ9D132 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.57■□□□□ 0.4
Upk1aQ9D132 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1aQ9D132 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1aQ9D132 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.56■□□□□ 0.4
Upk1aQ9D132 Gm21956-201ENSMUST00000179946 522 ntBASIC17.56■□□□□ 0.4
Upk1aQ9D132 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.56■□□□□ 0.4
Upk1aQ9D132 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1aQ9D132 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.55■□□□□ 0.4
Upk1aQ9D132 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.55■□□□□ 0.4
Upk1aQ9D132 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1aQ9D132 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1aQ9D132 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.54■□□□□ 0.4
Upk1aQ9D132 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.54■□□□□ 0.4
Upk1aQ9D132 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Upk1aQ9D132 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1aQ9D132 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Upk1aQ9D132 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1aQ9D132 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Upk1aQ9D132 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.53■□□□□ 0.4
Upk1aQ9D132 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1aQ9D132 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1aQ9D132 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1aQ9D132 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1aQ9D132 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1aQ9D132 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1aQ9D132 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1aQ9D132 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1aQ9D132 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1aQ9D132 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1aQ9D132 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1aQ9D132 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.52■□□□□ 0.4
Upk1aQ9D132 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.52■□□□□ 0.4
Upk1aQ9D132 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.52■□□□□ 0.4
Upk1aQ9D132 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.52■□□□□ 0.4
Upk1aQ9D132 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms