Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Gm40848-201ENSMUST00000221998 324 ntBASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ssr1Q9CY50 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.02■□□□□ 0.8
Ssr1Q9CY50 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr1Q9CY50 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr1Q9CY50 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr1Q9CY50 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr1Q9CY50 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ssr1Q9CY50 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr1Q9CY50 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr1Q9CY50 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr1Q9CY50 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ssr1Q9CY50 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Ssr1Q9CY50 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ssr1Q9CY50 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr1Q9CY50 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssr1Q9CY50 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ssr1Q9CY50 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssr1Q9CY50 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Ssr1Q9CY50 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ssr1Q9CY50 Gm6139-201ENSMUST00000079261 882 ntBASIC20■□□□□ 0.79
Ssr1Q9CY50 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr1Q9CY50 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Gm27801-201ENSMUST00000184174 223 ntBASIC19.98■□□□□ 0.79
Ssr1Q9CY50 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Gm43017-201ENSMUST00000198296 752 ntBASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssr1Q9CY50 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Gm26833-201ENSMUST00000180899 440 ntBASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssr1Q9CY50 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.96■□□□□ 0.79
Ssr1Q9CY50 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms