Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf135Q9CWS1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf135Q9CWS1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Gm38205-201ENSMUST00000192243 258 ntBASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf135Q9CWS1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf135Q9CWS1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Gm42778-201ENSMUST00000199644 553 ntBASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.22■□□□□ 0.67
Rnf135Q9CWS1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 AV356131-201ENSMUST00000206201 750 ntBASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf135Q9CWS1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.21■□□□□ 0.66
Rnf135Q9CWS1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf135Q9CWS1 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.2■□□□□ 0.66
Rnf135Q9CWS1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms