Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smurf1Q9CUN6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.83■□□□□ 0.28
Smurf1Q9CUN6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.83■□□□□ 0.28
Smurf1Q9CUN6 Gm12922-201ENSMUST00000120626 809 ntBASIC16.83■□□□□ 0.28
Smurf1Q9CUN6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Smurf1Q9CUN6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smurf1Q9CUN6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smurf1Q9CUN6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smurf1Q9CUN6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smurf1Q9CUN6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.82■□□□□ 0.28
Smurf1Q9CUN6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smurf1Q9CUN6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smurf1Q9CUN6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smurf1Q9CUN6 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.82■□□□□ 0.28
Smurf1Q9CUN6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smurf1Q9CUN6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smurf1Q9CUN6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smurf1Q9CUN6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.82■□□□□ 0.28
Smurf1Q9CUN6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smurf1Q9CUN6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smurf1Q9CUN6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smurf1Q9CUN6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smurf1Q9CUN6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Smurf1Q9CUN6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms