Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Gm43017-201ENSMUST00000198296 752 ntBASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nkiras2Q9CR56 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nkiras2Q9CR56 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 AA386476-201ENSMUST00000098781 1665 ntBASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Gm26833-201ENSMUST00000180899 440 ntBASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkiras2Q9CR56 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkiras2Q9CR56 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nkiras2Q9CR56 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Gm11421-201ENSMUST00000122124 294 ntBASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Serp2-204ENSMUST00000228055 705 ntBASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkiras2Q9CR56 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.63■□□□□ 0.25
Nkiras2Q9CR56 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkiras2Q9CR56 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkiras2Q9CR56 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkiras2Q9CR56 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.63■□□□□ 0.25
Nkiras2Q9CR56 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkiras2Q9CR56 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms