Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.16■□□□□ 0.34
Q9CR55 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Q9CR55 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Q9CR55 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.15■□□□□ 0.34
Q9CR55 Etf1-202ENSMUST00000180351 108 ntBASIC17.15■□□□□ 0.34
Q9CR55 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q9CR55 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CR55 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Q9CR55 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CR55 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CR55 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CR55 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.14■□□□□ 0.33
Q9CR55 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.14■□□□□ 0.33
Q9CR55 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CR55 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Q9CR55 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.14■□□□□ 0.33
Q9CR55 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Q9CR55 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CR55 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Q9CR55 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Q9CR55 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CR55 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CR55 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CR55 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Q9CR55 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CR55 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CR55 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CR55 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CR55 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CR55 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Q9CR55 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CR55 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CR55 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Q9CR55 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.12■□□□□ 0.33
Q9CR55 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Q9CR55 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Q9CR55 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Q9CR55 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Q9CR55 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CR55 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Q9CR55 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.11■□□□□ 0.33
Q9CR55 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Q9CR55 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CR55 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.11■□□□□ 0.33
Q9CR55 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CR55 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Q9CR55 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Q9CR55 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Q9CR55 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.1■□□□□ 0.33
Q9CR55 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.1■□□□□ 0.33
Q9CR55 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.1■□□□□ 0.33
Q9CR55 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CR55 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Q9CR55 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CR55 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CR55 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms