Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldnd1Q9CQX5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Gm27741-201ENSMUST00000185060 237 ntBASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Timm23-208ENSMUST00000226683 750 ntBASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Odf3b-204ENSMUST00000227834 930 ntBASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.06■□□□□ 0.64
Cldnd1Q9CQX5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Gm15375-201ENSMUST00000119510 849 ntBASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldnd1Q9CQX5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Gm3375-201ENSMUST00000203929 796 ntBASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldnd1Q9CQX5 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldnd1Q9CQX5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cldnd1Q9CQX5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldnd1Q9CQX5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldnd1Q9CQX5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldnd1Q9CQX5 Gm37292-201ENSMUST00000192062 758 ntBASIC19.02■□□□□ 0.64
Cldnd1Q9CQX5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cldnd1Q9CQX5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldnd1Q9CQX5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldnd1Q9CQX5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldnd1Q9CQX5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cldnd1Q9CQX5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cldnd1Q9CQX5 Gm12382-201ENSMUST00000122005 922 ntBASIC19■□□□□ 0.63
Cldnd1Q9CQX5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms