Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm7Q9CQQ8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lsm7Q9CQQ8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm7Q9CQQ8 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.76■□□□□ 0.59
Lsm7Q9CQQ8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm7Q9CQQ8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm7Q9CQQ8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Lsm7Q9CQQ8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm7Q9CQQ8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.73■□□□□ 0.59
Lsm7Q9CQQ8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm7Q9CQQ8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Lsm7Q9CQQ8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm7Q9CQQ8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm7Q9CQQ8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm7Q9CQQ8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm7Q9CQQ8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm7Q9CQQ8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.73■□□□□ 0.59
Lsm7Q9CQQ8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm7Q9CQQ8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Gm2559-201ENSMUST00000201323 363 ntBASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm7Q9CQQ8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm7Q9CQQ8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm7Q9CQQ8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lsm7Q9CQQ8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.71■□□□□ 0.59
Lsm7Q9CQQ8 Gm8520-201ENSMUST00000186517 868 ntBASIC18.71■□□□□ 0.59
Lsm7Q9CQQ8 Trmt13-210ENSMUST00000198454 880 ntBASIC18.71■□□□□ 0.59
Lsm7Q9CQQ8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm7Q9CQQ8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lsm7Q9CQQ8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm7Q9CQQ8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm7Q9CQQ8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm7Q9CQQ8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm7Q9CQQ8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lsm7Q9CQQ8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm7Q9CQQ8 Gm44549-201ENSMUST00000208351 577 ntBASIC18.7■□□□□ 0.58
Lsm7Q9CQQ8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm7Q9CQQ8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm7Q9CQQ8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm7Q9CQQ8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Gm12896-201ENSMUST00000118430 226 ntBASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Gm37856-201ENSMUST00000191634 999 ntBASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm7Q9CQQ8 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.68■□□□□ 0.58
Lsm7Q9CQQ8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm7Q9CQQ8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Lsm7Q9CQQ8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms