Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39lQ9CQD0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39lQ9CQD0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39lQ9CQD0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39lQ9CQD0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39lQ9CQD0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39lQ9CQD0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rpl39lQ9CQD0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39lQ9CQD0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39lQ9CQD0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39lQ9CQD0 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.09□□□□□ -0.47
Rpl39lQ9CQD0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39lQ9CQD0 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms