Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa3Q9CQ71 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Gm27405-201ENSMUST00000184201 112 ntBASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa3Q9CQ71 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.54■□□□□ 0.72
Rpa3Q9CQ71 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpa3Q9CQ71 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpa3Q9CQ71 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rpa3Q9CQ71 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rpa3Q9CQ71 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rpa3Q9CQ71 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rpa3Q9CQ71 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Gm7291-201ENSMUST00000199147 382 ntBASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms