Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnf111Q99ML9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf111Q99ML9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf111Q99ML9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.93■□□□□ 0.46
Rnf111Q99ML9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.92■□□□□ 0.46
Rnf111Q99ML9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf111Q99ML9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rnf111Q99ML9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rnf111Q99ML9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms