Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd2Q99JR8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd2Q99JR8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.79■□□□□ 0.6
Smarcd2Q99JR8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Mir5122-201ENSMUST00000175004 89 ntBASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd2Q99JR8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd2Q99JR8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.77■□□□□ 0.6
Smarcd2Q99JR8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.77■□□□□ 0.6
Smarcd2Q99JR8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd2Q99JR8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smarcd2Q99JR8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd2Q99JR8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smarcd2Q99JR8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 Zfp783-201ENSMUST00000095946 670 ntBASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smarcd2Q99JR8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd2Q99JR8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd2Q99JR8 Gm11643-201ENSMUST00000119578 864 ntBASIC18.75■□□□□ 0.59
Smarcd2Q99JR8 Mtag2-201ENSMUST00000058665 714 ntBASIC18.75■□□□□ 0.59
Smarcd2Q99JR8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd2Q99JR8 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.75■□□□□ 0.59
Smarcd2Q99JR8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd2Q99JR8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smarcd2Q99JR8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd2Q99JR8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd2Q99JR8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd2Q99JR8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd2Q99JR8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Smarcd2Q99JR8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd2Q99JR8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd2Q99JR8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.74■□□□□ 0.59
Smarcd2Q99JR8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd2Q99JR8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd2Q99JR8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcd2Q99JR8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smarcd2Q99JR8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd2Q99JR8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd2Q99JR8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd2Q99JR8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Smarcd2Q99JR8 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.73■□□□□ 0.59
Smarcd2Q99JR8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.73■□□□□ 0.59
Smarcd2Q99JR8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Smarcd2Q99JR8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd2Q99JR8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd2Q99JR8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcd2Q99JR8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms