Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb4Q91XX6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb4Q91XX6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb4Q91XX6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb4Q91XX6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb4Q91XX6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb4Q91XX6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb4Q91XX6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdhgb4Q91XX6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb4Q91XX6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb4Q91XX6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb4Q91XX6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhgb4Q91XX6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Pcdhgb4Q91XX6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhgb4Q91XX6 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.58■□□□□ 0.73
Pcdhgb4Q91XX6 Gm13234-201ENSMUST00000120010 747 ntBASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb4Q91XX6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdhgb4Q91XX6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb4Q91XX6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb4Q91XX6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb4Q91XX6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb4Q91XX6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Pcdhgb4Q91XX6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb4Q91XX6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb4Q91XX6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb4Q91XX6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb4Q91XX6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb4Q91XX6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Pcdhgb4Q91XX6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Gm13534-201ENSMUST00000121169 513 ntBASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdhgb4Q91XX6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Grk6-206ENSMUST00000224995 2971 ntBASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb4Q91XX6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms