Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lims2Q91XD2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lims2Q91XD2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.06■□□□□ 0.64
Lims2Q91XD2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Lims2Q91XD2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lims2Q91XD2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lims2Q91XD2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lims2Q91XD2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lims2Q91XD2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Lims2Q91XD2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lims2Q91XD2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lims2Q91XD2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lims2Q91XD2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lims2Q91XD2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Lims2Q91XD2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lims2Q91XD2 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.05■□□□□ 0.64
Lims2Q91XD2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lims2Q91XD2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lims2Q91XD2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lims2Q91XD2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Lims2Q91XD2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lims2Q91XD2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lims2Q91XD2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Lims2Q91XD2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lims2Q91XD2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Lims2Q91XD2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lims2Q91XD2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lims2Q91XD2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lims2Q91XD2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lims2Q91XD2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lims2Q91XD2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Lims2Q91XD2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lims2Q91XD2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lims2Q91XD2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lims2Q91XD2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lims2Q91XD2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.03■□□□□ 0.64
Lims2Q91XD2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lims2Q91XD2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Lims2Q91XD2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lims2Q91XD2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lims2Q91XD2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lims2Q91XD2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.02■□□□□ 0.64
Lims2Q91XD2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.02■□□□□ 0.64
Lims2Q91XD2 Gm10653-202ENSMUST00000139570 835 ntBASIC19.02■□□□□ 0.64
Lims2Q91XD2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lims2Q91XD2 Gm27011-201ENSMUST00000182352 972 ntBASIC19.02■□□□□ 0.64
Lims2Q91XD2 Gm37856-201ENSMUST00000191634 999 ntBASIC19.02■□□□□ 0.64
Lims2Q91XD2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.02■□□□□ 0.64
Lims2Q91XD2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.02■□□□□ 0.64
Lims2Q91XD2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Lims2Q91XD2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lims2Q91XD2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Lims2Q91XD2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lims2Q91XD2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lims2Q91XD2 Gm2399-201ENSMUST00000104944 225 ntBASIC19.01■□□□□ 0.63
Lims2Q91XD2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.01■□□□□ 0.63
Lims2Q91XD2 Gm2559-201ENSMUST00000201323 363 ntBASIC19.01■□□□□ 0.63
Lims2Q91XD2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lims2Q91XD2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lims2Q91XD2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lims2Q91XD2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lims2Q91XD2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lims2Q91XD2 Gm12896-201ENSMUST00000118430 226 ntBASIC19■□□□□ 0.63
Lims2Q91XD2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lims2Q91XD2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19■□□□□ 0.63
Lims2Q91XD2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19■□□□□ 0.63
Lims2Q91XD2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lims2Q91XD2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lims2Q91XD2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lims2Q91XD2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lims2Q91XD2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lims2Q91XD2 Gm9194-201ENSMUST00000220749 1447 ntBASIC19■□□□□ 0.63
Lims2Q91XD2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.99■□□□□ 0.63
Lims2Q91XD2 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms