Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh18Q8VHR0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh18Q8VHR0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh18Q8VHR0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh18Q8VHR0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh18Q8VHR0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh18Q8VHR0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdh18Q8VHR0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh18Q8VHR0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh18Q8VHR0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh18Q8VHR0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh18Q8VHR0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.77■□□□□ 0.43
Pcdh18Q8VHR0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Gm43137-201ENSMUST00000198052 594 ntBASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Gm13241-201ENSMUST00000094493 780 ntBASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh18Q8VHR0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh18Q8VHR0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh18Q8VHR0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Serp2-204ENSMUST00000228055 705 ntBASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Pcdh18Q8VHR0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms