Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa1Q8VEE4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rpa1Q8VEE4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa1Q8VEE4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa1Q8VEE4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa1Q8VEE4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rpa1Q8VEE4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.63■□□□□ 0.57
Rpa1Q8VEE4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa1Q8VEE4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa1Q8VEE4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rpa1Q8VEE4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa1Q8VEE4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa1Q8VEE4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa1Q8VEE4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpa1Q8VEE4 Gm22238-201ENSMUST00000175222 88 ntBASIC18.61■□□□□ 0.57
Rpa1Q8VEE4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa1Q8VEE4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa1Q8VEE4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa1Q8VEE4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa1Q8VEE4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa1Q8VEE4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Rpa1Q8VEE4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa1Q8VEE4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpa1Q8VEE4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rpa1Q8VEE4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rpa1Q8VEE4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
Rpa1Q8VEE4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpa1Q8VEE4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpa1Q8VEE4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpa1Q8VEE4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpa1Q8VEE4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpa1Q8VEE4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpa1Q8VEE4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpa1Q8VEE4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rpa1Q8VEE4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa1Q8VEE4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa1Q8VEE4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms