Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Rprd1aQ8VDS4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rprd1aQ8VDS4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rprd1aQ8VDS4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rprd1aQ8VDS4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.03■□□□□ 0.64
Rprd1aQ8VDS4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Rprd1aQ8VDS4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rprd1aQ8VDS4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rprd1aQ8VDS4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rprd1aQ8VDS4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rprd1aQ8VDS4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rprd1aQ8VDS4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rprd1aQ8VDS4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rprd1aQ8VDS4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Rprd1aQ8VDS4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rprd1aQ8VDS4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Gm5408-201ENSMUST00000197998 747 ntBASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rprd1aQ8VDS4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rprd1aQ8VDS4 Gm13509-201ENSMUST00000119733 1308 ntBASIC19■□□□□ 0.63
Rprd1aQ8VDS4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rprd1aQ8VDS4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rprd1aQ8VDS4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rprd1aQ8VDS4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19■□□□□ 0.63
Rprd1aQ8VDS4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Rprd1aQ8VDS4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rprd1aQ8VDS4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rprd1aQ8VDS4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rprd1aQ8VDS4 Gm37563-201ENSMUST00000192580 1513 ntBASIC19■□□□□ 0.63
Rprd1aQ8VDS4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rprd1aQ8VDS4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rprd1aQ8VDS4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rprd1aQ8VDS4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 152.7 ms