Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Uhrf1Q8VDF2 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.21■□□□□ 0.67
Uhrf1Q8VDF2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
Uhrf1Q8VDF2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Zfp783-201ENSMUST00000095946 670 ntBASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Uhrf1Q8VDF2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Uhrf1Q8VDF2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Uhrf1Q8VDF2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Uhrf1Q8VDF2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Uhrf1Q8VDF2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Uhrf1Q8VDF2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Uhrf1Q8VDF2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Uhrf1Q8VDF2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Uhrf1Q8VDF2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Uhrf1Q8VDF2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Uhrf1Q8VDF2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Uhrf1Q8VDF2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Gm43183-201ENSMUST00000200632 547 ntBASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Gm21814-202ENSMUST00000203277 873 ntBASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Uhrf1Q8VDF2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 Gm10138-203ENSMUST00000206952 366 ntBASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Uhrf1Q8VDF2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Uhrf1Q8VDF2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Uhrf1Q8VDF2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Uhrf1Q8VDF2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Uhrf1Q8VDF2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Uhrf1Q8VDF2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Uhrf1Q8VDF2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Uhrf1Q8VDF2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Uhrf1Q8VDF2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Uhrf1Q8VDF2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Uhrf1Q8VDF2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Uhrf1Q8VDF2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Uhrf1Q8VDF2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Uhrf1Q8VDF2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Uhrf1Q8VDF2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Uhrf1Q8VDF2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Uhrf1Q8VDF2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Uhrf1Q8VDF2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Uhrf1Q8VDF2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Uhrf1Q8VDF2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Uhrf1Q8VDF2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Uhrf1Q8VDF2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms