Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Fam20bQ8VCS3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam20bQ8VCS3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Fam20bQ8VCS3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam20bQ8VCS3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam20bQ8VCS3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam20bQ8VCS3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam20bQ8VCS3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fam20bQ8VCS3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam20bQ8VCS3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam20bQ8VCS3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Fam20bQ8VCS3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam20bQ8VCS3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Fam20bQ8VCS3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Fam20bQ8VCS3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam20bQ8VCS3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Fam20bQ8VCS3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.18■□□□□ 0.34
Fam20bQ8VCS3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms