Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ndc1Q8VCB1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Gm26524-201ENSMUST00000192339 390 ntBASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Gm20049-201ENSMUST00000219950 730 ntBASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.44■□□□□ 0.38
Ndc1Q8VCB1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Gm20760-201ENSMUST00000179197 648 ntBASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndc1Q8VCB1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Rab3c-203ENSMUST00000224180 967 ntBASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Ndc1Q8VCB1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ndc1Q8VCB1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndc1Q8VCB1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms