Protein–RNA interactions for Protein: Q8VBZ3

Clptm1, Cleft lip and palate transmembrane protein 1 homolog, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1Q8VBZ3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clptm1Q8VBZ3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clptm1Q8VBZ3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clptm1Q8VBZ3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Clptm1Q8VBZ3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Gm4968-201ENSMUST00000071458 858 ntBASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clptm1Q8VBZ3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clptm1Q8VBZ3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.83■□□□□ 0.61
Clptm1Q8VBZ3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clptm1Q8VBZ3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.83■□□□□ 0.61
Clptm1Q8VBZ3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clptm1Q8VBZ3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clptm1Q8VBZ3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.83■□□□□ 0.6
Clptm1Q8VBZ3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clptm1Q8VBZ3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clptm1Q8VBZ3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.83■□□□□ 0.6
Clptm1Q8VBZ3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clptm1Q8VBZ3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clptm1Q8VBZ3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clptm1Q8VBZ3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clptm1Q8VBZ3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Nespas-201ENSMUST00000143738 1083 ntBASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clptm1Q8VBZ3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clptm1Q8VBZ3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Gm13148-201ENSMUST00000118892 745 ntBASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Gm6420-201ENSMUST00000193885 723 ntBASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Gm6365-201ENSMUST00000054711 744 ntBASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clptm1Q8VBZ3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms