Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.69■□□□□ 0.9
Cacnb1Q8R3Z5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 BC021767-201ENSMUST00000126387 1716 ntBASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cacnb1Q8R3Z5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Gm29107-201ENSMUST00000190910 347 ntBASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb1Q8R3Z5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Cacnb1Q8R3Z5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb1Q8R3Z5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacnb1Q8R3Z5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacnb1Q8R3Z5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cacnb1Q8R3Z5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb1Q8R3Z5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb1Q8R3Z5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb1Q8R3Z5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb1Q8R3Z5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb1Q8R3Z5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb1Q8R3Z5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb1Q8R3Z5 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.63■□□□□ 0.89
Cacnb1Q8R3Z5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb1Q8R3Z5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb1Q8R3Z5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb1Q8R3Z5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cacnb1Q8R3Z5 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.63■□□□□ 0.89
Cacnb1Q8R3Z5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb1Q8R3Z5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms