Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zcchc9Q8R1J3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zcchc9Q8R1J3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zcchc9Q8R1J3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zcchc9Q8R1J3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
Zcchc9Q8R1J3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Zcchc9Q8R1J3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Zcchc9Q8R1J3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Zcchc9Q8R1J3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.43■□□□□ 0.54
Zcchc9Q8R1J3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Zcchc9Q8R1J3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Zcchc9Q8R1J3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zcchc9Q8R1J3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zcchc9Q8R1J3 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zcchc9Q8R1J3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zcchc9Q8R1J3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zcchc9Q8R1J3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Zcchc9Q8R1J3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zcchc9Q8R1J3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.39■□□□□ 0.53
Zcchc9Q8R1J3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.39■□□□□ 0.53
Zcchc9Q8R1J3 Gm2559-201ENSMUST00000201323 363 ntBASIC18.39■□□□□ 0.53
Zcchc9Q8R1J3 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.39■□□□□ 0.53
Zcchc9Q8R1J3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Zcchc9Q8R1J3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zcchc9Q8R1J3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zcchc9Q8R1J3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zcchc9Q8R1J3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zcchc9Q8R1J3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zcchc9Q8R1J3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zcchc9Q8R1J3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zcchc9Q8R1J3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zcchc9Q8R1J3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Zcchc9Q8R1J3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms