Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim31Q8R0K2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Gm13146-201ENSMUST00000118508 780 ntBASIC18.05■□□□□ 0.48
Trim31Q8R0K2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim31Q8R0K2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.04■□□□□ 0.48
Trim31Q8R0K2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.03■□□□□ 0.48
Trim31Q8R0K2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim31Q8R0K2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Gm7514-201ENSMUST00000209475 934 ntBASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim31Q8R0K2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trim31Q8R0K2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim31Q8R0K2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Rarb-207ENSMUST00000225921 2756 ntBASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim31Q8R0K2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms