Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.61□□□□□ -0.55
Cystm1Q8K353 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC11.61□□□□□ -0.55
Cystm1Q8K353 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC11.6□□□□□ -0.55
Cystm1Q8K353 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cystm1Q8K353 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC11.59□□□□□ -0.55
Cystm1Q8K353 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cystm1Q8K353 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Gm5828-201ENSMUST00000071842 1860 ntBASIC11.58□□□□□ -0.56
Cystm1Q8K353 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Gm7143-201ENSMUST00000222811 859 ntBASIC11.58□□□□□ -0.56
Cystm1Q8K353 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cystm1Q8K353 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.57□□□□□ -0.56
Cystm1Q8K353 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.57□□□□□ -0.56
Cystm1Q8K353 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Gm27454-201ENSMUST00000185090 204 ntBASIC11.57□□□□□ -0.56
Cystm1Q8K353 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms