Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim68Q8K243 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim68Q8K243 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim68Q8K243 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim68Q8K243 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim68Q8K243 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim68Q8K243 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Trim68Q8K243 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim68Q8K243 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim68Q8K243 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim68Q8K243 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim68Q8K243 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim68Q8K243 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim68Q8K243 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim68Q8K243 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim68Q8K243 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim68Q8K243 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.03■□□□□ 0.8
Trim68Q8K243 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim68Q8K243 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.03■□□□□ 0.8
Trim68Q8K243 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim68Q8K243 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim68Q8K243 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim68Q8K243 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim68Q8K243 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim68Q8K243 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim68Q8K243 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.02■□□□□ 0.8
Trim68Q8K243 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim68Q8K243 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim68Q8K243 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim68Q8K243 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Trim68Q8K243 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Trim68Q8K243 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.02■□□□□ 0.8
Trim68Q8K243 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim68Q8K243 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.02■□□□□ 0.8
Trim68Q8K243 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim68Q8K243 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim68Q8K243 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim68Q8K243 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim68Q8K243 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim68Q8K243 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Trim68Q8K243 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim68Q8K243 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim68Q8K243 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim68Q8K243 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim68Q8K243 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim68Q8K243 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim68Q8K243 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.01■□□□□ 0.79
Trim68Q8K243 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim68Q8K243 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim68Q8K243 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim68Q8K243 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim68Q8K243 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim68Q8K243 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim68Q8K243 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim68Q8K243 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim68Q8K243 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim68Q8K243 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim68Q8K243 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim68Q8K243 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trim68Q8K243 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim68Q8K243 Gm7860-201ENSMUST00000121190 879 ntBASIC20■□□□□ 0.79
Trim68Q8K243 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim68Q8K243 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim68Q8K243 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim68Q8K243 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim68Q8K243 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim68Q8K243 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim68Q8K243 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trim68Q8K243 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim68Q8K243 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim68Q8K243 Gm715-201ENSMUST00000117865 831 ntBASIC19.99■□□□□ 0.79
Trim68Q8K243 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim68Q8K243 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim68Q8K243 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim68Q8K243 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim68Q8K243 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim68Q8K243 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim68Q8K243 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.99■□□□□ 0.79
Trim68Q8K243 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim68Q8K243 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim68Q8K243 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.98■□□□□ 0.79
Trim68Q8K243 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trim68Q8K243 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim68Q8K243 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim68Q8K243 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim68Q8K243 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim68Q8K243 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim68Q8K243 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim68Q8K243 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim68Q8K243 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim68Q8K243 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.97■□□□□ 0.79
Trim68Q8K243 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim68Q8K243 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Trim68Q8K243 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Trim68Q8K243 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim68Q8K243 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim68Q8K243 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim68Q8K243 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim68Q8K243 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim68Q8K243 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms