Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot3Q8K0V4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot3Q8K0V4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cnot3Q8K0V4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.39■□□□□ 0.37
Cnot3Q8K0V4 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.39■□□□□ 0.37
Cnot3Q8K0V4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot3Q8K0V4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot3Q8K0V4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Cnot3Q8K0V4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot3Q8K0V4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot3Q8K0V4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot3Q8K0V4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot3Q8K0V4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot3Q8K0V4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot3Q8K0V4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot3Q8K0V4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Gm15546-201ENSMUST00000122095 826 ntBASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cnot3Q8K0V4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnot3Q8K0V4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnot3Q8K0V4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cnot3Q8K0V4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnot3Q8K0V4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cnot3Q8K0V4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnot3Q8K0V4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnot3Q8K0V4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms