Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.69■□□□□ 0.42
Hmgcs1Q8JZK9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.69■□□□□ 0.42
Hmgcs1Q8JZK9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcs1Q8JZK9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hmgcs1Q8JZK9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgcs1Q8JZK9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgcs1Q8JZK9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Hmgcs1Q8JZK9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hmgcs1Q8JZK9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hmgcs1Q8JZK9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgcs1Q8JZK9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.63■□□□□ 0.41
Hmgcs1Q8JZK9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgcs1Q8JZK9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgcs1Q8JZK9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgcs1Q8JZK9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgcs1Q8JZK9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgcs1Q8JZK9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgcs1Q8JZK9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgcs1Q8JZK9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms