Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rfwd3Q8CIK8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rfwd3Q8CIK8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Gm6420-201ENSMUST00000193885 723 ntBASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd3Q8CIK8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Gm37179-201ENSMUST00000194862 823 ntBASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd3Q8CIK8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms