Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.96■□□□□ 0.95
Depdc1aQ8CIG0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Depdc1aQ8CIG0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Depdc1aQ8CIG0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Depdc1aQ8CIG0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Depdc1aQ8CIG0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Depdc1aQ8CIG0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Depdc1aQ8CIG0 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.95■□□□□ 0.94
Depdc1aQ8CIG0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.95■□□□□ 0.94
Depdc1aQ8CIG0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Depdc1aQ8CIG0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Depdc1aQ8CIG0 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.95■□□□□ 0.94
Depdc1aQ8CIG0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.95■□□□□ 0.94
Depdc1aQ8CIG0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Depdc1aQ8CIG0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Depdc1aQ8CIG0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1aQ8CIG0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 Gm5643-201ENSMUST00000117081 966 ntBASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1aQ8CIG0 BC021767-201ENSMUST00000126387 1716 ntBASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Depdc1aQ8CIG0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Depdc1aQ8CIG0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Depdc1aQ8CIG0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Depdc1aQ8CIG0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
Depdc1aQ8CIG0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.91■□□□□ 0.94
Depdc1aQ8CIG0 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.91■□□□□ 0.94
Depdc1aQ8CIG0 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.91■□□□□ 0.94
Depdc1aQ8CIG0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Depdc1aQ8CIG0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Depdc1aQ8CIG0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Depdc1aQ8CIG0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.89■□□□□ 0.94
Depdc1aQ8CIG0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.89■□□□□ 0.94
Depdc1aQ8CIG0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Depdc1aQ8CIG0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Depdc1aQ8CIG0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.89■□□□□ 0.93
Depdc1aQ8CIG0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Depdc1aQ8CIG0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Depdc1aQ8CIG0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Depdc1aQ8CIG0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Depdc1aQ8CIG0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Depdc1aQ8CIG0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Depdc1aQ8CIG0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Depdc1aQ8CIG0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Depdc1aQ8CIG0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Depdc1aQ8CIG0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Depdc1aQ8CIG0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Depdc1aQ8CIG0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Depdc1aQ8CIG0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Depdc1aQ8CIG0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.88■□□□□ 0.93
Depdc1aQ8CIG0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Depdc1aQ8CIG0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms