Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vcpip1Q8CDG3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vcpip1Q8CDG3 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Gm7291-201ENSMUST00000199147 382 ntBASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vcpip1Q8CDG3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vcpip1Q8CDG3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcpip1Q8CDG3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcpip1Q8CDG3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcpip1Q8CDG3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vcpip1Q8CDG3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.86■□□□□ 0.77
Vcpip1Q8CDG3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcpip1Q8CDG3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcpip1Q8CDG3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vcpip1Q8CDG3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vcpip1Q8CDG3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vcpip1Q8CDG3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vcpip1Q8CDG3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vcpip1Q8CDG3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vcpip1Q8CDG3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vcpip1Q8CDG3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vcpip1Q8CDG3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vcpip1Q8CDG3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Vcpip1Q8CDG3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Vcpip1Q8CDG3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vcpip1Q8CDG3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Vcpip1Q8CDG3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.84■□□□□ 0.77
Vcpip1Q8CDG3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vcpip1Q8CDG3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vcpip1Q8CDG3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vcpip1Q8CDG3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vcpip1Q8CDG3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.83■□□□□ 0.77
Vcpip1Q8CDG3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vcpip1Q8CDG3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vcpip1Q8CDG3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcpip1Q8CDG3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcpip1Q8CDG3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Vcpip1Q8CDG3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcpip1Q8CDG3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vcpip1Q8CDG3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vcpip1Q8CDG3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vcpip1Q8CDG3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vcpip1Q8CDG3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vcpip1Q8CDG3 Gm38205-201ENSMUST00000192243 258 ntBASIC19.82■□□□□ 0.76
Vcpip1Q8CDG3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.82■□□□□ 0.76
Vcpip1Q8CDG3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.82■□□□□ 0.76
Vcpip1Q8CDG3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vcpip1Q8CDG3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms