Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.7■■□□□ 1.07
Shisa4Q8CA71 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa4Q8CA71 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Shisa4Q8CA71 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Shisa4Q8CA71 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.69■■□□□ 1.06
Shisa4Q8CA71 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shisa4Q8CA71 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.69■■□□□ 1.06
Shisa4Q8CA71 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shisa4Q8CA71 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shisa4Q8CA71 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.69■■□□□ 1.06
Shisa4Q8CA71 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shisa4Q8CA71 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.68■■□□□ 1.06
Shisa4Q8CA71 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shisa4Q8CA71 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.68■■□□□ 1.06
Shisa4Q8CA71 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.68■■□□□ 1.06
Shisa4Q8CA71 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shisa4Q8CA71 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.68■■□□□ 1.06
Shisa4Q8CA71 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shisa4Q8CA71 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shisa4Q8CA71 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.68■■□□□ 1.06
Shisa4Q8CA71 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shisa4Q8CA71 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shisa4Q8CA71 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shisa4Q8CA71 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shisa4Q8CA71 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shisa4Q8CA71 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Shisa4Q8CA71 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.67■■□□□ 1.06
Shisa4Q8CA71 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shisa4Q8CA71 Gm20760-201ENSMUST00000179197 648 ntBASIC21.66■■□□□ 1.06
Shisa4Q8CA71 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shisa4Q8CA71 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.66■■□□□ 1.06
Shisa4Q8CA71 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa4Q8CA71 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.65■■□□□ 1.06
Shisa4Q8CA71 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa4Q8CA71 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa4Q8CA71 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa4Q8CA71 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa4Q8CA71 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa4Q8CA71 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Shisa4Q8CA71 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shisa4Q8CA71 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.64■■□□□ 1.05
Shisa4Q8CA71 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.64■■□□□ 1.05
Shisa4Q8CA71 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.64■■□□□ 1.05
Shisa4Q8CA71 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Shisa4Q8CA71 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shisa4Q8CA71 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shisa4Q8CA71 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shisa4Q8CA71 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Shisa4Q8CA71 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Rab3c-203ENSMUST00000224180 967 ntBASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shisa4Q8CA71 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Gm12527-201ENSMUST00000117967 564 ntBASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa4Q8CA71 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Shisa4Q8CA71 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shisa4Q8CA71 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Shisa4Q8CA71 Mir7071-201ENSMUST00000184847 69 ntBASIC21.61■■□□□ 1.05
Shisa4Q8CA71 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Shisa4Q8CA71 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.61■■□□□ 1.05
Shisa4Q8CA71 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shisa4Q8CA71 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shisa4Q8CA71 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shisa4Q8CA71 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Shisa4Q8CA71 Gm8520-201ENSMUST00000186517 868 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms