Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 Gm8493-201ENSMUST00000196881 489 ntBASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Rfx6Q8C7R7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx6Q8C7R7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.83■□□□□ 0.6
Rfx6Q8C7R7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx6Q8C7R7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Rfx6Q8C7R7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rfx6Q8C7R7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx6Q8C7R7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx6Q8C7R7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx6Q8C7R7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.83■□□□□ 0.6
Rfx6Q8C7R7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx6Q8C7R7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx6Q8C7R7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 Gm43173-201ENSMUST00000202246 593 ntBASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.82■□□□□ 0.6
Rfx6Q8C7R7 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.81■□□□□ 0.6
Rfx6Q8C7R7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx6Q8C7R7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx6Q8C7R7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx6Q8C7R7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx6Q8C7R7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx6Q8C7R7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.77■□□□□ 0.6
Rfx6Q8C7R7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx6Q8C7R7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx6Q8C7R7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx6Q8C7R7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms