Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Cstf2tQ8C7E9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf2tQ8C7E9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf2tQ8C7E9 Gm25925-201ENSMUST00000158314 306 ntBASIC18.93■□□□□ 0.62
Cstf2tQ8C7E9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Cstf2tQ8C7E9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf2tQ8C7E9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf2tQ8C7E9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf2tQ8C7E9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf2tQ8C7E9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cstf2tQ8C7E9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Gm6659-201ENSMUST00000174752 547 ntBASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf2tQ8C7E9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Gm2399-201ENSMUST00000104944 225 ntBASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf2tQ8C7E9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf2tQ8C7E9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cstf2tQ8C7E9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf2tQ8C7E9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cstf2tQ8C7E9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Cstf2tQ8C7E9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
Cstf2tQ8C7E9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.88■□□□□ 0.61
Cstf2tQ8C7E9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf2tQ8C7E9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.88■□□□□ 0.61
Cstf2tQ8C7E9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf2tQ8C7E9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf2tQ8C7E9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms