Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.74■□□□□ 0.27
Col6a6Q8C6K9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Gm27741-201ENSMUST00000185060 237 ntBASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Col6a6Q8C6K9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Gm30025-201ENSMUST00000218555 728 ntBASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a6Q8C6K9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a6Q8C6K9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col6a6Q8C6K9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Flg-201ENSMUST00000050758 1488 ntBASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Odf3b-204ENSMUST00000227834 930 ntBASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a6Q8C6K9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a6Q8C6K9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Col6a6Q8C6K9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a6Q8C6K9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a6Q8C6K9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a6Q8C6K9 Gm21362-201ENSMUST00000194272 928 ntBASIC16.69■□□□□ 0.26
Col6a6Q8C6K9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a6Q8C6K9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a6Q8C6K9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.69■□□□□ 0.26
Col6a6Q8C6K9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a6Q8C6K9 Timm23-208ENSMUST00000226683 750 ntBASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms