Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc60Q8C4J0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc60Q8C4J0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc60Q8C4J0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc60Q8C4J0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc60Q8C4J0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.67■■□□□ 1.38
Ccdc60Q8C4J0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc60Q8C4J0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC23.67■■□□□ 1.38
Ccdc60Q8C4J0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc60Q8C4J0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc60Q8C4J0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 Gm43672-201ENSMUST00000199072 1731 ntBASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc60Q8C4J0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc60Q8C4J0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ccdc60Q8C4J0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ccdc60Q8C4J0 Gm7290-201ENSMUST00000104990 617 ntBASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Gm13148-201ENSMUST00000118892 745 ntBASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Gm12918-201ENSMUST00000120234 636 ntBASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Gm15710-201ENSMUST00000121821 636 ntBASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Gm5075-201ENSMUST00000196916 622 ntBASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc60Q8C4J0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Gm12933-201ENSMUST00000120203 872 ntBASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Gm6211-202ENSMUST00000167849 925 ntBASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Mir5133-201ENSMUST00000174955 77 ntBASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc60Q8C4J0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ccdc60Q8C4J0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ccdc60Q8C4J0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
Ccdc60Q8C4J0 Gm8309-201ENSMUST00000206627 1448 ntBASIC23.62■■□□□ 1.37
Ccdc60Q8C4J0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.62■■□□□ 1.37
Ccdc60Q8C4J0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.62■■□□□ 1.37
Ccdc60Q8C4J0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ccdc60Q8C4J0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
Ccdc60Q8C4J0 Gm6627-201ENSMUST00000218299 2386 ntBASIC23.62■■□□□ 1.37
Ccdc60Q8C4J0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ccdc60Q8C4J0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ccdc60Q8C4J0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ccdc60Q8C4J0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ccdc60Q8C4J0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ccdc60Q8C4J0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ccdc60Q8C4J0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms