Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.87■■□□□ 1.25
Ptcd1Q8C2E4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptcd1Q8C2E4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC22.87■■□□□ 1.25
Ptcd1Q8C2E4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ptcd1Q8C2E4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC22.87■■□□□ 1.25
Ptcd1Q8C2E4 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.87■■□□□ 1.25
Ptcd1Q8C2E4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptcd1Q8C2E4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptcd1Q8C2E4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ptcd1Q8C2E4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptcd1Q8C2E4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC22.86■■□□□ 1.25
Ptcd1Q8C2E4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Ptcd1Q8C2E4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptcd1Q8C2E4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptcd1Q8C2E4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptcd1Q8C2E4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ptcd1Q8C2E4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ptcd1Q8C2E4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ptcd1Q8C2E4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ptcd1Q8C2E4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.85■■□□□ 1.25
Ptcd1Q8C2E4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptcd1Q8C2E4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptcd1Q8C2E4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptcd1Q8C2E4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ptcd1Q8C2E4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptcd1Q8C2E4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptcd1Q8C2E4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptcd1Q8C2E4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptcd1Q8C2E4 Gm6433-201ENSMUST00000118634 875 ntBASIC22.84■■□□□ 1.25
Ptcd1Q8C2E4 Gm10231-201ENSMUST00000181584 441 ntBASIC22.84■■□□□ 1.25
Ptcd1Q8C2E4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptcd1Q8C2E4 Gm10175-202ENSMUST00000208752 441 ntBASIC22.84■■□□□ 1.25
Ptcd1Q8C2E4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Ptcd1Q8C2E4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptcd1Q8C2E4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ptcd1Q8C2E4 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.83■■□□□ 1.25
Ptcd1Q8C2E4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ptcd1Q8C2E4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ptcd1Q8C2E4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ptcd1Q8C2E4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ptcd1Q8C2E4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.83■■□□□ 1.25
Ptcd1Q8C2E4 Mir5122-201ENSMUST00000175004 89 ntBASIC22.83■■□□□ 1.25
Ptcd1Q8C2E4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ptcd1Q8C2E4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ptcd1Q8C2E4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptcd1Q8C2E4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Ptcd1Q8C2E4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptcd1Q8C2E4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.82■■□□□ 1.24
Ptcd1Q8C2E4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptcd1Q8C2E4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptcd1Q8C2E4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Ptcd1Q8C2E4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ptcd1Q8C2E4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptcd1Q8C2E4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ptcd1Q8C2E4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Gm5417-201ENSMUST00000079706 384 ntBASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Ptcd1Q8C2E4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ptcd1Q8C2E4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Ptcd1Q8C2E4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptcd1Q8C2E4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
Ptcd1Q8C2E4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC22.8■■□□□ 1.24
Ptcd1Q8C2E4 Gm43799-201ENSMUST00000201845 579 ntBASIC22.8■■□□□ 1.24
Ptcd1Q8C2E4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptcd1Q8C2E4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ptcd1Q8C2E4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.8■■□□□ 1.24
Ptcd1Q8C2E4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptcd1Q8C2E4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptcd1Q8C2E4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Ptcd1Q8C2E4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ptcd1Q8C2E4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ptcd1Q8C2E4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC22.78■■□□□ 1.24
Ptcd1Q8C2E4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ptcd1Q8C2E4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC22.78■■□□□ 1.24
Ptcd1Q8C2E4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Ptcd1Q8C2E4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ptcd1Q8C2E4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.77■■□□□ 1.24
Ptcd1Q8C2E4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ptcd1Q8C2E4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ptcd1Q8C2E4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ptcd1Q8C2E4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms