Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim4Q8C1Q6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim4Q8C1Q6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim4Q8C1Q6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim4Q8C1Q6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim4Q8C1Q6 Gm6139-201ENSMUST00000079261 882 ntBASIC15.52■□□□□ 0.08
Smim4Q8C1Q6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim4Q8C1Q6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smim4Q8C1Q6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim4Q8C1Q6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim4Q8C1Q6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim4Q8C1Q6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim4Q8C1Q6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim4Q8C1Q6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim4Q8C1Q6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smim4Q8C1Q6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Smim4Q8C1Q6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smim4Q8C1Q6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim4Q8C1Q6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim4Q8C1Q6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim4Q8C1Q6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim4Q8C1Q6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim4Q8C1Q6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smim4Q8C1Q6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim4Q8C1Q6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Smim4Q8C1Q6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim4Q8C1Q6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim4Q8C1Q6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Gm40848-201ENSMUST00000221998 324 ntBASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim4Q8C1Q6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim4Q8C1Q6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim4Q8C1Q6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim4Q8C1Q6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim4Q8C1Q6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms