Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf3Q8C120 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.32■□□□□ 0.68
Sh3rf3Q8C120 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
Sh3rf3Q8C120 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Sh3rf3Q8C120 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf3Q8C120 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf3Q8C120 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf3Q8C120 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf3Q8C120 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf3Q8C120 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf3Q8C120 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf3Q8C120 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf3Q8C120 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf3Q8C120 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.31■□□□□ 0.68
Sh3rf3Q8C120 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf3Q8C120 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf3Q8C120 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf3Q8C120 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf3Q8C120 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sh3rf3Q8C120 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Grk6-206ENSMUST00000224995 2971 ntBASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf3Q8C120 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 Gm18671-201ENSMUST00000214826 683 ntBASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf3Q8C120 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sh3rf3Q8C120 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3rf3Q8C120 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3rf3Q8C120 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3rf3Q8C120 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3rf3Q8C120 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Nespas-201ENSMUST00000143738 1083 ntBASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Gm6420-201ENSMUST00000193885 723 ntBASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 AV356131-201ENSMUST00000206201 750 ntBASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3rf3Q8C120 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms